Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921940.1_cds_XP_016470809.1_63218
CDS Infomation

[gene=LOC107793044] [db_xref=GeneID:107793044] [protein=patellin-3-like] [protein_id=XP_016470809.1] [location=complement(join(6531..6779,7161..7302,7402..7526,8133..9317))] [gbkey=CDS]
Sequence

ATGGCTGAAGAAACCAAGAAAATGGCTGAAGAAACGACACCAGAAGTGGTGGTTTCTGAT
GTTACAGTGAGTGAAACACCTCAACCTGAGCCGGAAAACTTGCCGGAGTCGCCAGAAAAA
TCTGCTGCTCCGGAGACCGGAGAATCCAAGGTTGGGAGTGATAAGGATGAGAAGGACCTT
GTTGCTGAATCCACTTCCTTTAAGGAAGAAAGTAACAAGGTTGAAGAACTCCCTAATCCT
GAACAAAAAGCATTGGCTGAATTCAAACAGCTAATTCAAGAAGCTCTTAACAAACACGAA
TTCACTTCCCCTCCGCCTCCGCCGTCACCGCCGGCAGCCAAGGAGAAGGAGGAGGAGAAA
AAAGCAGCCCCTGTTGAGGCACCGGACGCAGAGCCGGTTACAGAGGTAGTATCTGAGCCG
GTGGCAGCACCGGCGACGGTGGAAATTGAATTGGAGAAAAAGGAAGAGAAAGTCACTCCA
CCGGAAACAGAAGTAACTCCGGTACCGGCGCCTGAGACACCATCGGAGCCGGAGAAGTTG
GAGGCAGCCGAAGAAATCAAGGAAACAATTGTCGAAGTACCCGCGGCTGTTGCTGTGGCG
GCGGCAGCGGAGGAGCCACCGGCGACGGAGGAAGCAGAGGAGCCAAAAACAGGGTGTACA
CCACCACCGGAAGAAGTATCCATATGGGGAATACCCCTATTAGCTGACGAGAGAAGTGAC
GTCATCCTCCTCAAGTTTCTAAGAGCAAGAGATTTCAAGGTGAAAGAAGCTTTCACCATG
CTAAAAAGTGTTGTTGCATGGAGAAAAGAATTCAAAATTGATGAACTTTTGGATGAGAAA
GATTTAGGTCAAGGACTTGAGAAAGTTGTGTACAATTATGGTTTGGACAAAGAAGGACAC
CCTGTTTGTTACAATGCATTTGGTGAATTCCAAAACAAGGAATTGTATCAAAATACTTTT
GCTGATAAGGAGAAGCTAACCAAATTCCTCAGATGGAGAATTCAGTTCATGGAAAAGTCA
ATCAGGAATCTTGATTTTAGCCCTGATGGTATCTGCACTTTTGTTCAAGTTATTGATCTT
AAGAATTCTCCTGGTCTGTTCTTTTTCAAGAAAGAACTTCGCCAGGCTACAAATCGTGCT
CTTCAATTACTTCAGGATAATTACCCTGAATTTGTTGCCAAACAGGTGTTCATCAATGTT
CCATGGTGGTACCCAGCTTACTACAGAATGATAAATGCAATTTTTACTACAAGGACAAAG
AGCAAGTTTGTTTTTGCTGGTCCTTCAAGATCTGCCGAGACCCTTTTCAAATACATAACC
CCAGAACAAGTACCAGCACAATATGGTGGACTGAGCAAGGAAGGTGAACAGGAATTCACT
GTTGCTGAACCTGCCACAGAGGACATCATTAAGCCAGCTTCTAAACACACCATTGAATTC
CCAGTTACTGAGAAGTGCAGTTTGGTTTGGGAAGCAAGAGTGACAGGGTGGGATGTATCT
TATGGAGCTGAATTTGTACCAACTGCTGAAGGTGGATACACAATAATTATAGAGAAATCA
AGAAAAGTTGTGGCAAATGAAACAGTGATCAGCAACACATATAAGGCAGGAGAACAAGGC
AAAGTGGTGATCACATTTGACAACCAAAGTTCTAAAAAGAAGAAGCTTGTTTACAGGTCC
AAGAACAAGCCCTCGGATTGA

Peptide Sequence

PEP ID

XP_016470809.1
PEP Infomation

PREDICTED: patellin-3-like [Nicotiana tabacum]
Sequence

MAEETKKMAEETTPEVVVSDVTVSETPQPEPENLPESPEKSAAPETGESKVGSDKDEKDL
VAESTSFKEESNKVEELPNPEQKALAEFKQLIQEALNKHEFTSPPPPPSPPAAKEKEEEK
KAAPVEAPDAEPVTEVVSEPVAAPATVEIELEKKEEKVTPPETEVTPVPAPETPSEPEKL
EAAEEIKETIVEVPAAVAVAAAAEEPPATEEAEEPKTGCTPPPEEVSIWGIPLLADERSD
VILLKFLRARDFKVKEAFTMLKSVVAWRKEFKIDELLDEKDLGQGLEKVVYNYGLDKEGH
PVCYNAFGEFQNKELYQNTFADKEKLTKFLRWRIQFMEKSIRNLDFSPDGICTFVQVIDL
KNSPGLFFFKKELRQATNRALQLLQDNYPEFVAKQVFINVPWWYPAYYRMINAIFTTRTK
SKFVFAGPSRSAETLFKYITPEQVPAQYGGLSKEGEQEFTVAEPATEDIIKPASKHTIEF
PVTEKCSLVWEARVTGWDVSYGAEFVPTAEGGYTIIIEKSRKVVANETVISNTYKAGEQG
KVVITFDNQSSKKKKLVYRSKNKPSD

Transcript Sequence

Gene sequence data has not been registered.